Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_01260 | Not Available | Positive | 1300953 - 1301177 | 8563.33 |
| Major capsid protein precursor | SK85_01261 | Not Available | Positive | 1301469 - 1302626 | 43062.8 |
| Prohead protease | SK85_01262 | Not Available | Positive | 1302666 - 1303238 | 21687.5 |
| Phage portal protein, hk97 family | SK85_01263 | Q9ZXB2 | Positive | 1303276 - 1304451 | 43784.9 |
| Putative head-tail adaptor | SK85_01264 | Not Available | Positive | 1304448 - 1304786 | 12429.2 |
| hypothetical protein | SK85_01265 | Not Available | Positive | 1304783 - 1305079 | 11106.4 |
| Hypothetical protein | SK85_01266 | Not Available | Positive | 1305079 - 1305519 | 17225.3 |
| Terminase small subunit | SK85_01267 | Not Available | Positive | 1305808 - 1306164 | 13283.6 |
| Terminase large subunit | SK85_01268 | P59217 | Positive | 1306148 - 1307809 | 62661.7 |
| Attr | Not Available | Not Available | Positive | 1308783 - 1308798 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





