Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage excisionase | SK85_01560 | P76057 | Negative | 1579800 - 1580018 | 8563.47 |
| double-strand break reduction protein | SK85_01561 | P33230 | Negative | 1580097 - 1580306 | 7863.49 |
| protein rect | SK85_01562 | P33228 | Negative | 1580550 - 1580990 | 16450.5 |
| transposase | SK85_01563 | Not Available | Positive | 1581120 - 1581446 | 12644.0 |
| transposase | SK85_01564 | Not Available | Positive | 1581446 - 1582084 | 24538.6 |
| transposase insd for insertion element is2a/d/f/h/i/k | SK85_01565 | P0CF60 | Positive | 1582085 - 1582269 | 6976.17 |
| hypothetical protein | SK85_01566 | Not Available | Positive | 1582283 - 1582480 | 7435.78 |
| hypothetical protein | SK85_01567 | Not Available | Positive | 1582490 - 1583194 | 26100.7 |
| hypothetical protein | SK85_01568 | Not Available | Positive | 1583205 - 1583498 | 10933.4 |
| manganese/iron transport system permease | SK85_01569 | Q56955 | Negative | 1583850 - 1584707 | 30618.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





