Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low conductance mechanosensitive channel ynai | SK85_01540 | P0AEB6 | Negative | 1561599 - 1562630 | 38756.8 |
| inner membrane protein | SK85_01541 | P64447 | Positive | 1562874 - 1563131 | 9339.82 |
| universal stress protein e | SK85_01542 | P0AAC2 | Negative | 1563181 - 1564131 | 35708.9 |
| fumarate and nitrate reduction regulatory protein | SK85_01543 | P0A9E7 | Negative | 1564283 - 1565035 | 27968.9 |
| methylated-dna-protein-cysteine methyltransferase | SK85_01544 | P0AFH0 | Negative | 1565230 - 1565745 | 19180.3 |
| p-aminobenzoyl-glutamate transporter | SK85_01545 | P46133 | Negative | 1565756 - 1567282 | 54871.2 |
| p-aminobenzoyl-glutamate hydrolase subunit b | SK85_01546 | P76052 | Negative | 1567319 - 1567915 | 21641.5 |
| p-aminobenzoyl-glutamate hydrolase subunit b | SK85_01547 | Not Available | Negative | 1567961 - 1568764 | 28835.8 |
| p-aminobenzoyl-glutamate hydrolase subunit a | SK85_01548 | P77357 | Negative | 1568764 - 1570074 | 46590.9 |
| transcriptional regulator | SK85_01549 | P77744 | Positive | 1570250 - 1571158 | 34045.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





