Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside triphosphate hydrolase | SK85_01530 | P76046 | Positive | 1550825 - 1552222 | 52612.5 |
| inner membrane protein | SK85_01531 | B7MLZ8 | Positive | 1552219 - 1553280 | 39394.5 |
| transcriptional regulatory protein tyrr | SK85_01532 | P07604 | Positive | 1553428 - 1554969 | 57659.5 |
| thiol peroxidase | SK85_01533 | P0A864 | Negative | 1555013 - 1555519 | 17836.3 |
| l-ala-d/l-glu epimerase | SK85_01534 | P51981 | Positive | 1555638 - 1556603 | 34676.0 |
| murein peptide amidase a | SK85_01535 | P0ACV7 | Negative | 1556578 - 1557306 | 26589.4 |
| hypothetical protein | SK85_01536 | Q2EER5 | Negative | 1557388 - 1557570 | 6725.37 |
| hydrolase | SK85_01537 | P76049 | Negative | 1557641 - 1558561 | 33660.3 |
| transcriptional regulator | SK85_01538 | P77333 | Positive | 1558699 - 1559598 | 33559.9 |
| periplasmic murein peptide-binding protein | SK85_01539 | P77348 | Positive | 1559935 - 1561548 | 59903.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





