Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane abc transporter permease ycjo | SK85_01520 | P0AFR7 | Positive | 1539929 - 1540810 | 33227.3 |
| inner membrane abc transporter permease ycjp | SK85_01521 | P77716 | Positive | 1540797 - 1541639 | 31252.2 |
| oxidoreductase, zn-dependent and nad(p)-binding | SK85_01522 | P76043 | Positive | 1541670 - 1542722 | 38218.6 |
| hypothetical protein | SK85_01523 | P76044 | Positive | 1542741 - 1543529 | 29833.6 |
| oxidoreductase, nadh-binding | SK85_01524 | P77503 | Positive | 1543539 - 1544594 | 38672.4 |
| hydrolase | SK85_01525 | P77154 | Positive | 1544591 - 1546858 | 84872.1 |
| beta-phosphoglucomutase | SK85_01526 | P77366 | Positive | 1546855 - 1547514 | 23566.3 |
| maltose/maltodextrin transport system atp-binding protein | SK85_01527 | P77481 | Positive | 1547528 - 1548610 | 40129.9 |
| outer membrane protein g | SK85_01528 | P76045 | Positive | 1548655 - 1549560 | 34915.0 |
| transcriptional regulator | SK85_01529 | P77615 | Negative | 1549671 - 1550669 | 36136.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





