Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamylputrescine oxidoreductase | SK85_01510 | P37906 | Positive | 1530939 - 1532219 | 47128.2 |
| 4-aminobutyrate aminotransferase puue | SK85_01511 | P50457 | Positive | 1532257 - 1533522 | 44731.7 |
| psp operon transcriptional activator | SK85_01512 | P37344 | Negative | 1533642 - 1534619 | 36988.7 |
| phage shock protein a | SK85_01513 | P0AFM7 | Positive | 1534786 - 1535454 | 25494.4 |
| phage shock protein b | SK85_01514 | P0AFN1 | Positive | 1535508 - 1535732 | 8763.59 |
| phage shock protein c | SK85_01515 | P0AFN4 | Positive | 1535732 - 1536091 | 13517.7 |
| phage shock protein d | SK85_01516 | P0AFV9 | Positive | 1536100 - 1536321 | 8042.22 |
| thiosulfate sulfurtransferase pspe | SK85_01517 | P23857 | Positive | 1536396 - 1536710 | 11476.0 |
| glucosyltransferase | SK85_01518 | P76041 | Positive | 1536923 - 1538602 | 64220.3 |
| sugar abc transporter periplasmic-binding protein | SK85_01519 | P76042 | Positive | 1538616 - 1539908 | 46781.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





