Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide transport system atp-binding protein sapd | SK85_01500 | P0AAH6 | Negative | 1519344 - 1520336 | 37662.9 |
| peptide transport system permease sapc | SK85_01501 | P0AGH6 | Negative | 1520336 - 1521226 | 31550.0 |
| peptide transport system permease sapb | SK85_01502 | P0AGH4 | Negative | 1521213 - 1522178 | 36040.2 |
| peptide transport periplasmic protein sapa | SK85_01503 | Q47622 | Negative | 1522175 - 1523818 | 61568.2 |
| hypothetical protein | SK85_01504 | P0ACV8 | Negative | 1524131 - 1524376 | 9321.8 |
| putrescine importer puup | SK85_01505 | P76037 | Negative | 1524510 - 1525895 | 50868.0 |
| gamma-glutamylputrescine synthetase puua | SK85_01506 | P78061 | Negative | 1526198 - 1527616 | 53146.2 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase puud | SK85_01507 | P76038 | Positive | 1527839 - 1528591 | 27527.1 |
| hth-type transcriptional regulator puur | SK85_01508 | P0A9U6 | Positive | 1528618 - 1529175 | 20092.8 |
| aldehyde dehydrogenase puuc | SK85_01509 | P23883 | Positive | 1529450 - 1530937 | 53421.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





