Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor 1 | SK85_01490 | P08245 | Positive | 1509366 - 1509692 | 11369.8 |
| osmotically-inducible lipoprotein b | SK85_01491 | P0ADA9 | Negative | 1509818 - 1510036 | 6948.51 |
| transcriptional regulator | SK85_01492 | P76034 | Negative | 1510305 - 1511054 | 27590.2 |
| hypothetical protein | SK85_01493 | B7UR93 | Negative | 1511144 - 1511317 | 6441.71 |
| cyclic di-gmp phosphodiesterase gmr | SK85_01494 | P77334 | Negative | 1511465 - 1513450 | 74669.2 |
| exoribonuclease 2 | SK85_01495 | A7ZLA9 | Negative | 1513686 - 1515620 | 72494.8 |
| oxidoreductase | SK85_01496 | P76035 | Negative | 1515688 - 1516815 | 42222.1 |
| enoyl-[acyl-carrier-protein] reductase | SK85_01497 | P0AEK5 | Negative | 1516959 - 1517747 | 27865.5 |
| hypothetical protein | SK85_01498 | P45736 | Negative | 1518115 - 1518468 | 14023.6 |
| peptide transport system atp-binding protein sapf | SK85_01499 | P0AAH9 | Negative | 1518536 - 1519342 | 30572.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





