Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator cysb | SK85_01480 | P0A9F5 | Positive | 1500563 - 1501537 | 36152.5 |
| hypothetical protein | SK85_01481 | P0CB62 | Positive | 1501868 - 1501996 | 4866.05 |
| hypothetical protein | SK85_01482 | P58094 | Positive | 1501999 - 1502166 | 6338.19 |
| hypothetical protein | SK85_01483 | P0DPO1 | Positive | 1502280 - 1502375 | 3822.77 |
| aconitate hydratase 1 | SK85_01484 | P25516 | Positive | 1502539 - 1505214 | 97652.8 |
| gtp cyclohydrolase-2 | SK85_01485 | A7ZL97 | Negative | 1505278 - 1505868 | 21837.3 |
| phosphatidylglycerophosphatase b | SK85_01486 | P0A925 | Positive | 1506038 - 1506802 | 29022.8 |
| inner membrane protein ycis | SK85_01487 | P0ACV4 | Positive | 1506951 - 1507259 | 11352.1 |
| hypothetical protein | SK85_01488 | P0AB60 | Positive | 1507266 - 1508435 | 44533.6 |
| orotidine 5'-phosphate decarboxylase | SK85_01489 | C4ZTX6 | Positive | 1508569 - 1509366 | 28534.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





