Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate synthase component 1 | SK85_01470 | P00895 | Negative | 1488092 - 1489654 | 57497.7 |
| protein trph | SK85_01471 | P77766 | Positive | 1489928 - 1490809 | 32581.8 |
| sua5/ycio/yrdc/ywlc family trna threonylcarbamoyl adenosine modification protein | SK85_01472 | P0AFR5 | Positive | 1490806 - 1491426 | 23213.2 |
| inner membrane protein | SK85_01473 | P45848 | Positive | 1491454 - 1493349 | 71293.1 |
| ribosomal large subunit pseudouridine synthase b | SK85_01474 | P37765 | Positive | 1493560 - 1494435 | 32713.4 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | SK85_01475 | P0A9H6 | Negative | 1494475 - 1495065 | 22000.2 |
| oxoacyl-(acyl carrier protein) reductase, emrky-tolc system protein | SK85_01476 | P31808 | Negative | 1495062 - 1495820 | 27900.6 |
| signal peptide peptidase sppa, 36k type | SK85_01477 | P0AG14 | Positive | 1496040 - 1497089 | 39368.7 |
| protein ycin | SK85_01478 | P0AB63 | Negative | 1497125 - 1497376 | 9386.17 |
| dna topoisomerase 1 | SK85_01479 | P06612 | Positive | 1497756 - 1500353 | 97355.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





