Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative lom-like outer membrane protein | SK85_01245 | Not Available | Positive | 1288094 - 1288177 | 2871.52 |
| Attl | Not Available | Not Available | Positive | 1294371 - 1294386 | Not Available |
| Integrase | SK85_01252 | P06155 | Positive | 1294408 - 1295637 | 46691.6 |
| hypothetical protein | SK85_01253 | Not Available | Positive | 1296249 - 1297172 | 34107.0 |
| hypothetical protein | SK85_01254 | Not Available | Positive | 1297165 - 1297485 | 11774.0 |
| hypothetical protein | SK85_01255 | Not Available | Positive | 1297492 - 1297791 | 11592.1 |
| Dna primase | SK85_01256 | P10277 | Positive | 1297788 - 1299605 | 67701.9 |
| hypothetical protein | SK85_01257 | Not Available | Positive | 1299893 - 1300138 | 8926.52 |
| hypothetical protein | SK85_01258 | Not Available | Positive | 1300135 - 1300545 | 14295.8 |
| hypothetical protein | SK85_01259 | P0C962 | Positive | 1300556 - 1300828 | 10564.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





