Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein tonb | SK85_01389 | P02929 | Positive | 1423118 - 1423837 | 26085.6 |
| acyl-coa thioester hydrolase ycia | SK85_01390 | P0A8Z1 | Negative | 1423877 - 1424275 | 14231.4 |
| intracellular septation protein a | SK85_01391 | A7ZL35 | Negative | 1424380 - 1424919 | 20791.3 |
| inner membrane protein | SK85_01392 | C4ZTU8 | Negative | 1424949 - 1425692 | 26420.6 |
| outer membrane protein w | SK85_01393 | P0A915 | Positive | 1426049 - 1426702 | 23528.8 |
| Trna-met | Not Available | Not Available | Positive | 1446543 - 1446618 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1446716 - 1446792 | Not Available |
| tail fiber assembly protein | SK85_01457 | P76155 | Positive | 1477237 - 1477821 | 21727.2 |
| hypothetical protein | SK85_01458 | Not Available | Positive | 1477925 - 1478380 | 16881.8 |
| hypothetical protein | SK85_01459 | Not Available | Negative | 1478262 - 1478723 | 17256.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





