Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_01379 | Not Available | Negative | 1412631 - 1412792 | 5849.85 |
| periplasmic oligopeptide-binding protein | SK85_01380 | Not Available | Positive | 1413166 - 1414842 | 62659.1 |
| oligopeptide transport system permease oppb | SK85_01381 | P0AFH4 | Positive | 1414928 - 1415848 | 33445.3 |
| oligopeptide transport system permease oppc | SK85_01382 | P0AFH7 | Positive | 1415863 - 1416771 | 33023.9 |
| oligopeptide transport atp-binding protein oppd | SK85_01383 | P76027 | Positive | 1416783 - 1417796 | 37148.7 |
| oligopeptide transport atp-binding protein oppf | SK85_01384 | P77737 | Positive | 1417793 - 1418797 | 37183.8 |
| dsdna-mimic protein | SK85_01385 | A7ZL19 | Negative | 1418850 - 1419179 | 12687.7 |
| cardiolipin synthase | SK85_01386 | A7ZL20 | Negative | 1419214 - 1420674 | 54825.6 |
| voltage-gated potassium channel kch | SK85_01387 | P31069 | Negative | 1421045 - 1422298 | 46065.3 |
| protein ycii | SK85_01388 | P0AB56 | Negative | 1422598 - 1422894 | 10602.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





