Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | Positive | 1390286 - 1390370 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 1390580 - 1390664 | Not Available |
| formyltetrahydrofolate deformylase | SK85_01351 | P37051 | Negative | 1390824 - 1391666 | 31936.6 |
| sec-c domain-containing protein | SK85_01352 | B7LHH6 | Negative | 1391716 - 1392156 | 16344.3 |
| hypothetical protein | SK85_01353 | Not Available | Negative | 1393299 - 1393526 | 8346.1 |
| hypothetical protein | SK85_01354 | Not Available | Negative | 1393523 - 1394299 | 29171.4 |
| hypothetical protein | SK85_01355 | Not Available | Negative | 1394922 - 1395680 | 27674.3 |
| hypothetical protein | SK85_01356 | Not Available | Negative | 1395814 - 1396158 | 12693.3 |
| hypothetical protein | SK85_01357 | Not Available | Negative | 1396173 - 1396700 | 19397.3 |
| hypothetical protein | SK85_01358 | Not Available | Negative | 1397243 - 1397641 | 14990.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





