Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ychn | SK85_01339 | P0AB53 | Negative | 1376288 - 1376641 | 12693.5 |
| invasin | SK85_01340 | P39165 | Positive | 1376826 - 1378220 | 52102.6 |
| nitrate/nitrite response regulator protein narl | SK85_01341 | P0AF30 | Negative | 1378221 - 1378871 | 23928.3 |
| nitrate/nitrite sensor protein narx | SK85_01342 | P0AFA3 | Negative | 1378864 - 1380660 | 67088.0 |
| hypothetical protein | SK85_01343 | Not Available | Positive | 1380686 - 1380904 | 8571.26 |
| nitrate/nitrite transporter nark | SK85_01344 | P10903 | Positive | 1380999 - 1382390 | 49696.3 |
| respiratory nitrate reductase 1 alpha chain | SK85_01345 | P09152 | Positive | 1382906 - 1386649 | 140454.0 |
| respiratory nitrate reductase 1 beta chain | SK85_01346 | P11349 | Positive | 1386646 - 1388184 | 58069.5 |
| nitrate reductase molybdenum cofactor assembly chaperone narj | SK85_01347 | P0AF27 | Positive | 1388181 - 1388891 | 26450.3 |
| respiratory nitrate reductase 1 gamma chain | SK85_01348 | P11350 | Positive | 1388891 - 1389568 | 25484.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





