Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts-dependent dihydroxyacetone kinase operon regulatory protein | SK85_01319 | P76016 | Positive | 1355177 - 1357096 | 70565.9 |
| adhesin | SK85_01320 | P76017 | Negative | 1357196 - 1360063 | 99690.6 |
| hypothetical protein | SK85_01321 | Not Available | Positive | 1360408 - 1360587 | 7171.08 |
| ribosome-binding atpase ychf | SK85_01322 | P0ABU3 | Negative | 1360832 - 1361923 | 39669.6 |
| peptidyl-trna hydrolase | SK85_01323 | A7ZKX7 | Negative | 1362040 - 1362624 | 21083.5 |
| inner membrane protein | SK85_01324 | P0AB51 | Positive | 1362902 - 1363180 | 10486.9 |
| c4-dicarboxylic acid transporter daua | SK85_01325 | P0AFR3 | Negative | 1363235 - 1364887 | 58388.5 |
| ribose-phosphate pyrophosphokinase | SK85_01326 | P0A719 | Negative | 1365039 - 1366052 | 36651.3 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SK85_01327 | P62616 | Negative | 1366137 - 1366988 | 30927.1 |
| outer-membrane lipoprotein lolb | SK85_01328 | A7ZKY3 | Negative | 1366988 - 1367611 | 23552.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





