Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Major tail protein v | SK85_01236 | Not Available | Positive | 1277453 - 1278202 | 26302.8 |
| Tail component | SK85_01237 | Not Available | Positive | 1278221 - 1278652 | 15790.7 |
| Tail component | SK85_01238 | P03735 | Positive | 1278679 - 1279092 | 15139.9 |
| Tail component | SK85_01239 | P03736 | Positive | 1279073 - 1281634 | 92716.5 |
| Putative minor tail protein | SK85_01240 | Not Available | Positive | 1281631 - 1281960 | 12615.2 |
| Putative tail protein | SK85_01241 | Not Available | Positive | 1281960 - 1282658 | 25785.4 |
| Putative tail fiber component | SK85_01242 | Not Available | Positive | 1282669 - 1283412 | 28234.4 |
| Putative tail component | SK85_01243 | Not Available | Positive | 1283409 - 1283990 | 20280.6 |
| Putative tail fiber component j | SK85_01244 | Not Available | Positive | 1284334 - 1288026 | 134965.0 |
| Attr | Not Available | Not Available | Positive | 1286116 - 1286127 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





