Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin e, chromosomal | SK85_01299 | P77335 | Negative | 1333594 - 1334505 | 33700.2 |
| protein umud | SK85_01300 | P0AG12 | Positive | 1334878 - 1335297 | 15064.2 |
| protein umuc | SK85_01301 | P04152 | Positive | 1335297 - 1336565 | 47682.4 |
| disulfide bond formation protein b | SK85_01302 | P0A6M3 | Negative | 1336611 - 1337141 | 20143.3 |
| na(+)/h(+) antiporter nhab | SK85_01303 | A7ZKV7 | Negative | 1337287 - 1338828 | 56731.8 |
| fatty acid metabolism regulator protein | SK85_01304 | A7ZKV8 | Positive | 1339049 - 1339768 | 26969.2 |
| sporulation protein spovr | SK85_01305 | P29013 | Negative | 1339820 - 1341352 | 60817.1 |
| d-amino acid dehydrogenase small subunit | SK85_01306 | A7ZKW0 | Positive | 1341682 - 1342980 | 47610.1 |
| alanine racemase, catabolic | SK85_01307 | P29012 | Positive | 1342990 - 1344060 | 38846.9 |
| hypothetical protein | SK85_01308 | Not Available | Positive | 1344163 - 1344312 | 5554.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





