Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_01289 | P0AB47 | Negative | 1326416 - 1326745 | 11852.5 |
| hypothetical protein | SK85_01290 | A7ZKU1 | Negative | 1326755 - 1327039 | 8685.77 |
| cell division topological specificity factor | SK85_01291 | A7ZKU5 | Negative | 1328390 - 1328656 | 10235.5 |
| septum site-determining protein mind | SK85_01292 | P0AEZ5 | Negative | 1328660 - 1329472 | 29615.8 |
| septum site-determining protein minc | SK85_01293 | C4ZS93 | Negative | 1329496 - 1330191 | 24776.9 |
| hypothetical protein | SK85_01294 | P76001 | Positive | 1330711 - 1331079 | 13415.2 |
| protein ycgk | SK85_01295 | P76002 | Negative | 1331182 - 1331583 | 14906.6 |
| protein ycgl | SK85_01296 | B7MK76 | Positive | 1331825 - 1332118 | 11247.7 |
| isomerase/hydrolase | SK85_01297 | P76004 | Positive | 1332190 - 1332849 | 23712.5 |
| hypothetical protein | SK85_01298 | A7ZKV2 | Positive | 1332941 - 1333387 | 17329.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





