Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase insc for insertion element | SK85_01279 | Not Available | Negative | 1318589 - 1318954 | 13452.4 |
| hypothetical protein | SK85_01280 | Not Available | Negative | 1319237 - 1319718 | 17832.8 |
| hypothetical protein | SK85_01281 | P16942 | Negative | 1319719 - 1320142 | 16415.9 |
| transposase | SK85_01282 | Not Available | Negative | 1320142 - 1320468 | 12644.0 |
| inner membrane protein | SK85_01283 | P75995 | Positive | 1320688 - 1321701 | 38041.0 |
| inner membrane protein ymgf | SK85_01284 | P58034 | Positive | 1321833 - 1322051 | 8255.35 |
| hypothetical protein | SK85_01285 | Not Available | Positive | 1322451 - 1323902 | 50805.8 |
| transposase inse for insertion sequence is3e | SK85_01286 | Not Available | Positive | 1323949 - 1324248 | 11543.8 |
| transposase insf for insertion sequence is3d | SK85_01287 | Not Available | Positive | 1324245 - 1325111 | 33542.2 |
| hypothetical protein | SK85_01288 | P77286 | Positive | 1325317 - 1326333 | 37446.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





