Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional repressor comr | SK85_01177 | P75952 | Negative | 1232232 - 1232927 | 25791.7 |
| multiple stress resistance protein bhsa | SK85_01178 | P0AB42 | Positive | 1233105 - 1233362 | 8815.55 |
| l,d-transpeptidase linking lpp to murein | SK85_01179 | P75954 | Negative | 1233444 - 1234403 | 34490.7 |
| transcription-repair-coupling factor | SK85_01180 | P30958 | Negative | 1234550 - 1238044 | 131810.0 |
| inner membrane protein ycft | SK85_01181 | P75955 | Negative | 1238124 - 1239197 | 40835.9 |
| lipoprotein-releasing system transmembrane protein lolc | SK85_01182 | P0ADC5 | Positive | 1239459 - 1240658 | 43282.6 |
| lipoprotein-releasing system atp-binding protein lold | SK85_01183 | P75957 | Positive | 1240651 - 1241352 | 25439.9 |
| lipoprotein-releasing system transmembrane protein lole | SK85_01184 | P75958 | Positive | 1241358 - 1242596 | 45144.7 |
| n-acetyl-d-glucosamine kinase | SK85_01185 | B7LG53 | Positive | 1242625 - 1243536 | 33044.6 |
| nad-dependent protein deacylase | SK85_01186 | P75960 | Positive | 1243552 - 1244391 | 31465.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





