Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system glucose-specific eiicb component | SK85_01167 | P69788 | Positive | 1221901 - 1223334 | 50679.5 |
| fhue receptor | SK85_01168 | P16869 | Negative | 1223394 - 1225583 | 81236.9 |
| purine nucleoside phosphoramidase | SK85_01169 | P0ACE8 | Positive | 1225917 - 1226276 | 13242.1 |
| hypothetical protein | SK85_01170 | P75946 | Positive | 1226279 - 1226656 | 13981.9 |
| penicillin-binding protein activator lpob | SK85_01171 | P0AB39 | Positive | 1226670 - 1227311 | 22517.0 |
| thiamine kinase | SK85_01172 | C4ZS46 | Positive | 1227292 - 1228116 | 32399.1 |
| beta-hexosaminidase | SK85_01173 | C4ZS47 | Positive | 1228127 - 1229152 | 37596.9 |
| hypothetical protein | SK85_01174 | A7ZKL2 | Positive | 1229175 - 1229717 | 21227.4 |
| nadh dehydrogenase | SK85_01175 | P00393 | Positive | 1230117 - 1231421 | 47377.7 |
| hypothetical protein | SK85_01176 | P0AB36 | Positive | 1231631 - 1232170 | 18921.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





