Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] synthase 3 | SK85_01157 | A7ZKJ4 | Positive | 1212791 - 1213744 | 33517.0 |
| malonyl coa-acyl carrier protein transacylase | SK85_01158 | P0AAJ0 | Positive | 1213760 - 1214689 | 32419.0 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | SK85_01159 | P0AEK2 | Positive | 1214702 - 1215436 | 25561.9 |
| acyl carrier protein | SK85_01160 | P0A6B3 | Positive | 1215647 - 1215883 | 8639.99 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 | SK85_01161 | P0AAI7 | Positive | 1215971 - 1217212 | 43048.3 |
| aminodeoxychorismate lyase | SK85_01162 | P28305 | Positive | 1217332 - 1218141 | 29716.8 |
| aminodeoxychorismate lyase | SK85_01163 | P28306 | Positive | 1218144 - 1219166 | 38230.5 |
| thymidylate kinase | SK85_01164 | A7ZKK1 | Positive | 1219156 - 1219797 | 23784.6 |
| dna polymerase iii subunit delta' | SK85_01165 | P28631 | Positive | 1219794 - 1220798 | 36938.7 |
| tatd dnase | SK85_01166 | P0AFQ9 | Positive | 1220809 - 1221606 | 29810.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





