Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagella synthesis protein flgn | SK85_01137 | P43533 | Negative | 1193446 - 1193862 | 15867.9 |
| flagellar biosynthesis anti-sigma factor flgm | SK85_01138 | P0AEM4 | Negative | 1193867 - 1194160 | 10357.2 |
| flagella basal body p-ring formation protein flga | SK85_01139 | P75933 | Negative | 1194236 - 1194895 | 23520.5 |
| flagellar basal body rod protein flgb | SK85_01140 | P0ABX0 | Positive | 1195050 - 1195466 | 15241.1 |
| flagellar basal-body rod protein flgc | SK85_01141 | P0ABX4 | Positive | 1195470 - 1195874 | 13968.8 |
| basal-body rod modification protein flgd | SK85_01142 | P75936 | Positive | 1195886 - 1196581 | 23576.4 |
| flagellar hook protein flge | SK85_01143 | P75937 | Positive | 1196606 - 1197814 | 42019.5 |
| flagellar basal-body rod protein flgf | SK85_01144 | P75938 | Positive | 1197834 - 1198589 | 25913.7 |
| flagellar basal-body rod protein flgg | SK85_01145 | P0ABX7 | Positive | 1198761 - 1199543 | 27745.6 |
| flagellar l-ring protein | SK85_01146 | A7ZKI4 | Positive | 1199596 - 1200294 | 24616.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





