Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna packaging protein | SK85_01226 | P36693 | Positive | 1269060 - 1270988 | 72872.8 |
| Head-tail connector gpw | SK85_01227 | P68655 | Positive | 1270972 - 1271178 | 7700.46 |
| Bacteriophage portal protein | SK85_01228 | P36272 | Positive | 1271175 - 1272767 | 59611.5 |
| Bacteriophage prohead protease | SK85_01229 | P36273 | Positive | 1272757 - 1274262 | 52362.1 |
| Bacteriophage head decoration protein | SK85_01230 | P36275 | Positive | 1274299 - 1274646 | 11965.1 |
| Bacteriophage major capsid protein | SK85_01231 | P68650 | Positive | 1274704 - 1275732 | 38570.1 |
| hypothetical protein | SK85_01232 | P36276 | Positive | 1275784 - 1276158 | 13515.0 |
| Head-tail joining protein | SK85_01233 | Not Available | Positive | 1276151 - 1276504 | 12667.8 |
| Tail component | SK85_01234 | P03731 | Positive | 1276520 - 1277053 | 20153.1 |
| Tail component | SK85_01235 | Not Available | Positive | 1277050 - 1277445 | 14880.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





