Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucans biosynthesis glucosyltransferase h | SK85_01117 | P62518 | Positive | 1174924 - 1177437 | 95775.3 |
| hypothetical protein | SK85_01118 | P0AB32 | Positive | 1177610 - 1177837 | 8443.31 |
| acidic protein msyb | SK85_01119 | P25738 | Negative | 1177838 - 1178212 | 14259.9 |
| multidrug resistance protein mdtg | SK85_01120 | A7ZKF6 | Negative | 1178295 - 1179521 | 43870.0 |
| lipid a biosynthesis lauroyl acyltransferase | SK85_01121 | P0ACV1 | Negative | 1179693 - 1180613 | 35408.9 |
| hypothetical protein | SK85_01122 | C4ZRZ5 | Positive | 1180838 - 1181890 | 39783.4 |
| protein ycei | SK85_01123 | P0A8X3 | Negative | 1181932 - 1182507 | 20913.6 |
| cytochrome b561 | SK85_01124 | P75925 | Negative | 1182511 - 1183077 | 20737.6 |
| hypothetical protein | SK85_01125 | P64443 | Negative | 1183338 - 1183451 | 4719.1 |
| n-methyl-l-tryptophan oxidase | SK85_01126 | C4ZRZ9 | Negative | 1183499 - 1184617 | 40904.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





