Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| curli production assembly/transport component csge | SK85_01107 | P0AE97 | Negative | 1166183 - 1166572 | 14879.6 |
| csgbac operon transcriptional regulatory protein | SK85_01108 | P52106 | Negative | 1166577 - 1167227 | 24947.0 |
| minor curlin subunit | SK85_01109 | P0ABK8 | Positive | 1167982 - 1168437 | 15882.8 |
| major curlin subunit | SK85_01110 | P28307 | Positive | 1168478 - 1168933 | 15050.1 |
| curli assembly protein csgc | SK85_01111 | P52107 | Positive | 1168992 - 1169324 | 11967.3 |
| hypothetical protein | SK85_01112 | P75917 | Positive | 1169445 - 1169756 | 11194.7 |
| o-acetyl-adp-ribose deacetylase | SK85_01113 | P0A8D8 | Positive | 1169851 - 1170384 | 18881.5 |
| hydrolase | SK85_01114 | P75919 | Positive | 1170326 - 1171807 | 55929.7 |
| glucans biosynthesis protein c | SK85_01115 | C4ZRY8 | Negative | 1171815 - 1172972 | 44692.9 |
| glucans biosynthesis protein g | SK85_01116 | C4ZRY9 | Positive | 1173399 - 1174901 | 56609.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





