Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrous iron permease efeu | SK85_01087 | Q8XAS8 | Positive | 1145799 - 1146629 | 30345.7 |
| iron uptake system component efeo | SK85_01088 | P0AB24 | Positive | 1146687 - 1147814 | 41139.8 |
| deferrochelatase/peroxidase efeb | SK85_01089 | P31545 | Positive | 1147820 - 1149091 | 46756.9 |
| protein phoh | SK85_01090 | P0A9K2 | Positive | 1149436 - 1150500 | 39267.1 |
| biofilm pga synthesis protein pgad | SK85_01091 | P69433 | Negative | 1150550 - 1150963 | 16082.7 |
| poly-beta-1,6-n-acetyl-d-glucosamine synthase | SK85_01092 | P75905 | Negative | 1150965 - 1152290 | 50768.6 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase | SK85_01093 | P75906 | Negative | 1152283 - 1154301 | 77416.9 |
| poly-beta-1,6-n-acetyl-d-glucosamine export protein | SK85_01094 | P69435 | Negative | 1154310 - 1156688 | 90418.7 |
| diguanylate cyclase | SK85_01095 | P75908 | Positive | 1157320 - 1158678 | 51785.5 |
| transposase insf for insertion sequence is3 | SK85_01096 | Not Available | Negative | 1158719 - 1159585 | 33542.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





