Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type protein torc | SK85_01067 | P33226 | Positive | 1122527 - 1123699 | 43608.9 |
| trimethylamine-n-oxide reductase 1 | SK85_01068 | P33225 | Positive | 1123699 - 1126245 | 94461.2 |
| chaperone tord | SK85_01069 | P36662 | Positive | 1126242 - 1126841 | 22574.9 |
| chaperone modulatory protein cbpm | SK85_01070 | A7ZKA4 | Negative | 1126993 - 1127298 | 11512.9 |
| curved dna-binding protein | SK85_01071 | C4ZQC8 | Negative | 1127298 - 1128218 | 34456.9 |
| hypothetical protein | SK85_01072 | P36661 | Positive | 1128479 - 1129735 | 48365.9 |
| glucose-1-phosphatase | SK85_01073 | P19926 | Positive | 1130028 - 1131269 | 45685.4 |
| hypothetical protein | SK85_01074 | P0AB16 | Negative | 1131307 - 1131534 | 8524.89 |
| nad(p)h dehydrogenase (quinone) | SK85_01075 | A7ZKA9 | Negative | 1131555 - 1132151 | 20846.8 |
| hypothetical protein | SK85_01076 | P56614 | Positive | 1132524 - 1132697 | 5883.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





