Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-ii ubiquinol oxidase subunit 1 | SK85_01047 | P26459 | Positive | 1101624 - 1103168 | 57924.2 |
| cytochrome bd-ii ubiquinol oxidase subunit 2 | SK85_01048 | P26458 | Positive | 1103180 - 1104316 | 42426.3 |
| hypothetical protein | SK85_01049 | P24244 | Positive | 1104329 - 1104421 | 3597.68 |
| periplasmic appa protein | SK85_01050 | P07102 | Positive | 1104501 - 1105799 | 47075.5 |
| tyrosine-protein kinase etk | SK85_01051 | P38134 | Negative | 1105914 - 1108094 | 81274.6 |
| protein-tyrosine-phosphatase etp | SK85_01052 | P0ACZ3 | Negative | 1108114 - 1108560 | 16386.9 |
| exopolysaccharide export protein | SK85_01053 | P0A933 | Negative | 1108548 - 1109687 | 41757.2 |
| porin | SK85_01054 | Not Available | Negative | 1109733 - 1111028 | 48703.6 |
| hypothetical protein | SK85_01055 | P75882 | Negative | 1111158 - 1111829 | 25114.3 |
| hypothetical protein | SK85_01056 | P75883 | Negative | 1111829 - 1112575 | 27297.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





