Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SK85_01216 | Not Available | Positive | 1262968 - 1264821 | 65841.6 |
| Holin lysis protein s | SK85_01217 | Not Available | Positive | 1264972 - 1265187 | 8054.78 |
| Hypothetical protein | SK85_01218 | Not Available | Positive | 1265192 - 1265536 | 12776.6 |
| hypothetical protein | SK85_01219 | Not Available | Negative | 1265502 - 1265774 | 10232.9 |
| Putative r protein | SK85_01220 | Q9ZXB7 | Positive | 1265880 - 1266413 | 19501.4 |
| hypothetical protein | SK85_01221 | Not Available | Positive | 1266606 - 1266752 | 5070.46 |
| Hypothetical protein | SK85_01222 | Not Available | Positive | 1266767 - 1266898 | 4606.11 |
| Putative endopeptidase rz | SK85_01223 | Q9XJJ6 | Positive | 1266961 - 1267368 | 15204.0 |
| hypothetical protein | SK85_01224 | Not Available | Positive | 1267719 - 1267859 | 5128.42 |
| Gp1 | SK85_01225 | P68654 | Positive | 1268579 - 1269088 | 19171.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





