Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal rna large subunit methyltransferase k/l | SK85_01017 | B1X8Q2 | Positive | 1071728 - 1073836 | 78858.5 |
| abc transporter atp-binding protein uup | SK85_01018 | P43672 | Positive | 1073848 - 1075755 | 72071.1 |
| paraquat-inducible protein a | SK85_01019 | P0AFM0 | Positive | 1075885 - 1077138 | 46466.2 |
| paraquat-inducible protein b | SK85_01020 | P43671 | Positive | 1077143 - 1078783 | 60492.0 |
| hypothetical protein | SK85_01021 | P0AB10 | Positive | 1078780 - 1079343 | 20634.6 |
| ribosome modulation factor | SK85_01022 | P0AFW3 | Positive | 1079599 - 1079766 | 6507.88 |
| 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase | SK85_01023 | A7ZK57 | Negative | 1079836 - 1080462 | 23066.3 |
| peptidase | SK85_01024 | P75867 | Negative | 1080423 - 1082183 | 65822.4 |
| macrodomain ter protein | SK85_01025 | B7LE56 | Positive | 1082369 - 1082821 | 17694.4 |
| outer membrane protein a | SK85_01026 | P0A911 | Negative | 1082897 - 1083937 | 37202.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





