Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial subunit elfa | SK85_01007 | P75855 | Positive | 1061752 - 1062291 | 18680.8 |
| periplasmic pilin chaperone | SK85_01008 | P75856 | Positive | 1062374 - 1063075 | 25357.8 |
| outer membrane usher protein | SK85_01009 | P75857 | Positive | 1063100 - 1065700 | 95247.0 |
| fimbrial-like adhesin protein | SK85_01010 | P75858 | Positive | 1065691 - 1066761 | 37838.7 |
| fimbrial-like adhesin protein | SK85_01011 | P75859 | Positive | 1066773 - 1067315 | 18914.7 |
| fimbrial-like adhesin protein | SK85_01012 | P75860 | Positive | 1067275 - 1067838 | 20493.5 |
| periplasmic pilin chaperone | SK85_01013 | P40876 | Positive | 1067852 - 1068541 | 24968.3 |
| dihydroorotate dehydrogenase (quinone) | SK85_01014 | A7ZK49 | Positive | 1068652 - 1069662 | 36776.8 |
| cell division protein zapc | SK85_01015 | P75862 | Positive | 1069836 - 1070378 | 20589.9 |
| 2fe-2s cluster-containing protein | SK85_01016 | P75863 | Negative | 1070375 - 1071484 | 40646.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





