Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase | SK85_00997 | P00509 | Negative | 1048403 - 1049593 | 43575.7 |
| outer membrane protein f | SK85_00998 | P02931 | Negative | 1049778 - 1050866 | 39335.4 |
| asparagine-trna ligase | SK85_00999 | A7ZK21 | Negative | 1051469 - 1052869 | 52573.2 |
| nicotinate phosphoribosyltransferase | SK85_01000 | C4ZQ57 | Negative | 1053038 - 1054240 | 45899.8 |
| aminopeptidase n | SK85_01001 | P04825 | Positive | 1054506 - 1057118 | 98924.3 |
| aliphatic sulfonates import atp-binding protein ssub | SK85_01002 | P0AAI2 | Negative | 1057161 - 1057928 | 27739.9 |
| alkanesulfonate transporter subunit | SK85_01003 | P75851 | Negative | 1057925 - 1058716 | 28927.2 |
| alkanesulfonate monooxygenase | SK85_01004 | C4ZQ61 | Negative | 1058727 - 1059872 | 41738.6 |
| alkanesulfonate transporter subunit | SK85_01005 | P75853 | Negative | 1059869 - 1060828 | 34559.7 |
| fmn reductase (nadph) | SK85_01006 | P80644 | Negative | 1060821 - 1061396 | 21254.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





