Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-manno-octulosonate cytidylyltransferase | SK85_00987 | C4ZQ44 | Positive | 1034736 - 1035482 | 27616.0 |
| hypothetical protein | SK85_00988 | P0AB04 | Positive | 1035636 - 1036529 | 34489.6 |
| inner membrane protein | SK85_00989 | P0AB02 | Negative | 1036506 - 1037285 | 28668.0 |
| protein smta | SK85_00990 | P36566 | Positive | 1037421 - 1038206 | 29816.0 |
| chromosome partition protein mukf | SK85_00991 | A7ZK12 | Positive | 1038203 - 1039525 | 50581.7 |
| chromosome partition protein muke | SK85_00992 | P22524 | Positive | 1039506 - 1040210 | 26976.1 |
| chromosome partition protein mukb | SK85_00993 | C4ZQ50 | Positive | 1040210 - 1044670 | 170241.0 |
| murein l,d-transpeptidase | SK85_00994 | P22525 | Positive | 1044931 - 1046778 | 67844.3 |
| hypothetical protein | SK85_00995 | P0AB08 | Positive | 1046959 - 1047507 | 20355.6 |
| metal-binding protein | SK85_00996 | P75849 | Positive | 1047534 - 1048181 | 23785.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





