Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs family transporter | SK85_00967 | C4ZQ24 | Positive | 1009755 - 1010903 | 41434.2 |
| inner membrane transporter ycam | SK85_00968 | P75835 | Positive | 1011113 - 1012543 | 52499.5 |
| transcriptional regulator | SK85_00969 | P75836 | Negative | 1012544 - 1013452 | 34296.3 |
| nad(p)h dehydrogenase (quinone) | SK85_00970 | P43340 | Positive | 1013552 - 1014142 | 23037.4 |
| pyruvate formate-lyase 1-activating enzyme | SK85_00971 | P0A9N6 | Negative | 1014224 - 1014964 | 28205.9 |
| formate acetyltransferase 1 | SK85_00972 | P09373 | Negative | 1015156 - 1017438 | 85362.0 |
| formate transporter foca | SK85_00973 | P0AC25 | Negative | 1017493 - 1018350 | 30992.6 |
| ribosomal protein s12 methylthiotransferase accessory factor ycao | SK85_00974 | P75838 | Negative | 1018756 - 1020516 | 65655.0 |
| inner membrane protein | SK85_00975 | P75839 | Positive | 1020646 - 1021338 | 26283.5 |
| phosphoserine aminotransferase | SK85_00976 | C4ZQ33 | Positive | 1021537 - 1022625 | 39785.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





