Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin reductase | SK85_00957 | P0A9P5 | Negative | 994969 - 995934 | 34625.1 |
| leucine-responsive regulatory protein | SK85_00958 | P0ACJ2 | Positive | 996479 - 996973 | 18887.9 |
| dna translocase ftsk | SK85_00959 | P46889 | Positive | 997108 - 1001097 | 146673.0 |
| outer-membrane lipoprotein carrier protein | SK85_00960 | A7ZJW0 | Positive | 1001256 - 1001867 | 22498.2 |
| replication-associated recombination protein a | SK85_00961 | P0AAZ6 | Positive | 1001878 - 1003221 | 49628.8 |
| serine-trna ligase | SK85_00962 | A7ZJW2 | Positive | 1003312 - 1004604 | 48416.8 |
| dimethyl sulfoxide reductase dmsa | SK85_00963 | P18775 | Positive | 1004843 - 1007287 | 90403.7 |
| anaerobic dimethyl sulfoxide reductase chain b | SK85_00964 | P18776 | Positive | 1007298 - 1007915 | 22870.1 |
| anaerobic dimethyl sulfoxide reductase chain c | SK85_00965 | P18777 | Positive | 1007917 - 1008780 | 30876.3 |
| hydrolase | SK85_00966 | P21367 | Negative | 1008815 - 1009441 | 23101.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





