Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | SK85_00917 | P75818 | Negative | 956306 - 956821 | 18992.4 |
| hypothetical protein | SK85_00918 | A7ZJT5 | Positive | 956947 - 957270 | 11437.7 |
| n-acetylmuramoyl-l-alanine amidase amid | SK85_00919 | P75820 | Positive | 957267 - 958097 | 31074.1 |
| nad(p)h-binding oxidoreductase with nad(p)-binding rossmann-fold domain-containing protein | SK85_00920 | P75821 | Negative | 958094 - 959107 | 38087.9 |
| hypothetical protein | SK85_00921 | P75822 | Negative | 959206 - 960636 | 53710.1 |
| low specificity l-threonine aldolase | SK85_00922 | P75823 | Negative | 960647 - 961648 | 36496.8 |
| pyruvate dehydrogenase | SK85_00923 | P07003 | Negative | 961685 - 963403 | 62015.0 |
| nadh oxidoreductase hcr | SK85_00924 | P75824 | Negative | 963536 - 964504 | 35741.8 |
| hydroxylamine reductase | SK85_00925 | C4ZY45 | Negative | 964516 - 966168 | 60067.3 |
| hypothetical protein | SK85_00926 | P75826 | Negative | 966312 - 967211 | 32356.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





