Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine transport atp-binding protein potg | SK85_00907 | P31134 | Positive | 947345 - 948478 | 41931.3 |
| putrescine transport system permease poth | SK85_00908 | P31135 | Positive | 948488 - 949441 | 35464.6 |
| putrescine transport system permease poti | SK85_00909 | P0AFL2 | Positive | 949438 - 950283 | 30542.4 |
| inner membrane protein ybjo | SK85_00910 | P0AAZ2 | Positive | 950343 - 950831 | 18537.2 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | SK85_00911 | C4ZY31 | Positive | 950872 - 951999 | 41958.1 |
| abc transporter arginine-binding protein 1 | SK85_00912 | P30860 | Negative | 952198 - 952929 | 26830.9 |
| arginine abc transporter permease artm | SK85_00913 | P0AE32 | Negative | 953220 - 953888 | 24915.3 |
| arginine abc transporter permease artq | SK85_00914 | P0AE35 | Negative | 953888 - 954604 | 26218.7 |
| arginine transporter subunit | SK85_00915 | P30859 | Negative | 954611 - 955342 | 26931.0 |
| arginine transport atp-binding protein artp | SK85_00916 | P0AAF8 | Negative | 955360 - 956088 | 27023.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





