Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SK85_00789 | P75769 | Positive | 835031 - 835744 | 26110.8 |
| inner membrane protein ybhn | SK85_00790 | P75770 | Negative | 835780 - 836736 | 35892.6 |
| cardiolipin synthase 2 | SK85_00791 | P0AA85 | Negative | 836736 - 837977 | 47636.2 |
| dnase | SK85_00792 | P0AAW3 | Negative | 837974 - 838735 | 28791.4 |
| inner membrane protein ybhq | SK85_00793 | P0AAW7 | Positive | 838868 - 839278 | 15465.6 |
| inner membrane transport permease ybhr | SK85_00794 | P0AFQ0 | Negative | 839240 - 840346 | 41568.2 |
| inner membrane transport permease ybhs | SK85_00795 | P0AFQ4 | Negative | 840357 - 841490 | 42062.4 |
| abc transporter atp-binding protein | SK85_00796 | P0A9U1 | Negative | 841483 - 843219 | 63152.3 |
| hlyd family secretion protein | SK85_00797 | B5YS86 | Negative | 843212 - 844207 | 36287.7 |
| transcriptional regulator | SK85_00798 | P0ACU0 | Negative | 844210 - 844881 | 25018.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





