Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonyl-[acyl-carrier protein] o-methyltransferase | SK85_00779 | P12999 | Positive | 825760 - 826515 | 28277.8 |
| atp-dependent dethiobiotin synthetase biod 1 | SK85_00780 | P13000 | Positive | 826508 - 827185 | 24140.9 |
| uvrabc system protein b | SK85_00781 | A7ZJI8 | Positive | 827764 - 829785 | 76230.6 |
| transferase with nad(p)-binding rossmann-fold | SK85_00782 | P75767 | Negative | 829977 - 830885 | 32790.0 |
| cyclic pyranopterin monophosphate synthase | SK85_00783 | A7ZJJ0 | Positive | 831282 - 832271 | 37260.4 |
| molybdenum cofactor biosynthesis protein b | SK85_00784 | P0AF00 | Positive | 832293 - 832805 | 18666.1 |
| cyclic pyranopterin monophosphate synthase accessory protein | SK85_00785 | A7ZJJ2 | Positive | 832808 - 833293 | 17468.3 |
| molybdopterin synthase sulfur carrier subunit | SK85_00786 | P30748 | Positive | 833286 - 833531 | 8758.4 |
| molybdopterin synthase catalytic subunit | SK85_00787 | P30749 | Positive | 833533 - 833985 | 16981.9 |
| inner membrane protein ybhl | SK85_00788 | P0AAC5 | Positive | 834122 - 834826 | 25903.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





