Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein ybhi | SK85_00769 | P75763 | Positive | 813700 - 815133 | 51353.8 |
| hydratase | SK85_00770 | P75764 | Positive | 815316 - 817577 | 81509.2 |
| pectinesterase | SK85_00771 | P46130 | Negative | 817811 - 819094 | 46100.7 |
| integrase | SK85_00772 | P27078 | Negative | 819229 - 819537 | 11736.9 |
| transposase | SK85_00773 | Not Available | Negative | 820313 - 821200 | 33679.1 |
| transposase | SK85_00774 | Not Available | Negative | 821200 - 821526 | 12644.0 |
| kinase inhibitor | SK85_00775 | P12994 | Negative | 821671 - 822147 | 17086.0 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | SK85_00776 | P12995 | Negative | 822206 - 823495 | 47338.3 |
| biotin synthase | SK85_00777 | A7ZJI4 | Positive | 823582 - 824622 | 38650.3 |
| 8-amino-7-oxononanoate synthase | SK85_00778 | B1X7A6 | Positive | 824619 - 825773 | 41596.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





