Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_00719 | P0DPN5 | Negative | 766585 - 766692 | 3827.66 |
| succinate dehydrogenase cytochrome b556 subunit | SK85_00720 | P69055 | Positive | 767073 - 767477 | 14948.9 |
| succinate dehydrogenase hydrophobic membrane anchor subunit | SK85_00721 | P0AC45 | Positive | 767471 - 767818 | 12868.3 |
| succinate dehydrogenase flavoprotein subunit | SK85_00722 | P0AC43 | Positive | 767818 - 769584 | 64425.6 |
| succinate dehydrogenase iron-sulfur subunit | SK85_00723 | P07014 | Positive | 769600 - 770316 | 26771.4 |
| 2-oxoglutarate dehydrogenase e1 component | SK85_00724 | P0AFG5 | Positive | 770617 - 773418 | 105068.0 |
| dihydrolipoyltranssuccinase | SK85_00725 | P0AFG7 | Positive | 773433 - 774650 | 44014.0 |
| succinyl-coa ligase | SK85_00726 | A7ZJA8 | Positive | 774925 - 776091 | 41395.1 |
| succinyl-coa ligase | SK85_00727 | P0AGF1 | Positive | 776091 - 776960 | 29779.3 |
| mannosyl-d-glycerate transport/metabolism system repressor mngr | SK85_00728 | P13669 | Negative | 777064 - 777786 | 28274.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





