Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kipi family sensor histidine kinase inhibitor | SK85_00709 | P0AAV5 | Positive | 755505 - 756161 | 23937.9 |
| allophanate hydrolase subunit 2 | SK85_00710 | P75745 | Positive | 756155 - 757087 | 34388.4 |
| lactam utilization protein | SK85_00711 | C4ZWI8 | Positive | 757077 - 757811 | 25801.9 |
| endonuclease 8 | SK85_00712 | C4ZWI9 | Positive | 757847 - 758638 | 29846.8 |
| protein abrb | SK85_00713 | P75747 | Negative | 758635 - 759681 | 36886.1 |
| fimbrial-like adhesin protein | SK85_00714 | P75748 | Negative | 759833 - 760894 | 39540.7 |
| assembly protein | SK85_00715 | P75749 | Negative | 760891 - 761619 | 26955.6 |
| outer membrane protein | SK85_00716 | P75750 | Negative | 761634 - 764081 | 90132.6 |
| fimbrial-like adhesin protein | SK85_00717 | P37909 | Negative | 764141 - 764686 | 19036.2 |
| citrate synthase | SK85_00718 | P0ABH8 | Negative | 765096 - 766379 | 47974.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





