Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_00699 | P28915 | Positive | 746927 - 747496 | 21962.6 |
| h repeat-associated protein ybfd | SK85_00700 | Q2EEQ8 | Positive | 747722 - 747943 | 8515.19 |
| h repeat-associated protein yhhi | SK85_00701 | P28912 | Positive | 747944 - 748667 | 27363.0 |
| h repeat-associated protein ybfd | SK85_00702 | P28916 | Positive | 748798 - 749559 | 28866.6 |
| transposase | SK85_00703 | Not Available | Positive | 749762 - 750088 | 12613.9 |
| transposase | SK85_00704 | Not Available | Positive | 750088 - 750975 | 33706.2 |
| hypothetical protein | SK85_00705 | P24252 | Positive | 751021 - 751530 | 20212.4 |
| deoxyribodipyrimidine photo-lyase | SK85_00706 | P00914 | Positive | 751527 - 752945 | 53668.8 |
| dipeptide permease d | SK85_00707 | P75742 | Negative | 752987 - 754468 | 54162.1 |
| ybgi/family dinuclear metal center protein | SK85_00708 | P0AFP8 | Positive | 754739 - 755482 | 26894.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





