Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine decarboxylase, inducible | SK85_00689 | P24169 | Negative | 731003 - 733201 | 82421.3 |
| hypothetical protein | SK85_00690 | Not Available | Positive | 733324 - 733581 | 9499.61 |
| kdp operon transcriptional regulatory protein kdpe | SK85_00691 | P21866 | Negative | 733797 - 734474 | 25363.7 |
| sensor protein kdpd | SK85_00692 | P21865 | Negative | 734471 - 737155 | 98724.2 |
| potassium-transporting atpase c chain | SK85_00693 | C4ZWH2 | Negative | 737148 - 737720 | 20298.3 |
| potassium-transporting atpase b chain | SK85_00694 | C4ZWH3 | Negative | 737729 - 739777 | 72233.5 |
| potassium-transporting atpase a chain | SK85_00695 | A7ZXV9 | Negative | 739800 - 741473 | 59162.7 |
| hypothetical protein | SK85_00696 | P0AAU3 | Positive | 741875 - 742081 | 8275.0 |
| protein rhsc | SK85_00697 | P16918 | Positive | 742324 - 745959 | 137519.0 |
| protein rhsa | SK85_00698 | P77779 | Positive | 746022 - 746930 | 34488.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





