Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail tape measure protein | SK85_00895 | O64314 | Positive | 935287 - 938364 | 108855.0 |
| Tail protein | SK85_00896 | Not Available | Positive | 938361 - 938846 | 18074.9 |
| Tail protein | SK85_00897 | P21679 | Positive | 938843 - 939943 | 40957.7 |
| Hypothetical protein | SK85_00898 | P08762 | Positive | 940034 - 940252 | 7964.55 |
| Attl | Not Available | Not Available | Positive | 1238521 - 1238532 | Not Available |
| Integrase | SK85_01191 | P75969 | Negative | 1247819 - 1248937 | 42695.4 |
| hypothetical protein | SK85_01192 | Not Available | Negative | 1248906 - 1249175 | 10185.4 |
| Exodeoxyribonuclease viii | SK85_01193 | P15032 | Negative | 1249237 - 1251675 | 90352.9 |
| hypothetical protein | SK85_01194 | P29010 | Negative | 1251768 - 1251956 | 6729.17 |
| phage cell division inhibition protein | SK85_01195 | Not Available | Negative | 1251953 - 1252141 | 7078.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





