Burkholderia cepacia strain LK29 189

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia cepacia strain LK29 189 is a Gram-negative microaerophilic bacterium, characterized by its ability to thrive in environments with low oxygen levels. This strain belongs to the Burkholderia genus, which is known for its metabolic versatility and adaptability to various ecological niches. The microaerophilic requirement indicates that strain LK29 189 may be particularly well-suited for environments where oxygen is present in limited quantities, such as in soil or water with organic matter decomposition. The Gram-negative nature of this strain suggests a complex cell envelope structure, including an outer membrane that can affect its interaction with other microorganisms and its resistance to certain antibiotics. These traits may offer insights into its ecological role and potential applications in bioremediation or agriculture, where it might contribute to nutrient cycling or assist in the degradation of pollutants. Understanding the specific conditions under which Burkholderia cepacia strain LK29 189 thrives can inform its potential use in biotechnological applications, particularly in microaerophilic environments. This highlights the importance of studying its metabolic pathways and interactions within microbial communities, as such insights could lead to novel strategies for harnessing its capabilities in various environmental contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia cepacia
Strainstrain LK29 189

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Burkholderia cepacia strain LK29 189
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia cepacia strain LK29 189


Gene Summary

Adenine Count

1502503 bp

Thymine Count

1493223 bp

Guanine Count

2908883 bp

Cytosine Count

2938972 bp

Genome Length

8843581 bp

Protein-coding Genes

7469 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative tail fiber assembly potein homologVL15_16195Not Available+3782013 - 378279228874.6
Contractile tail sheath proteinVL15_16200Q02TE1+3782877 - 378404641601.3
AttlNot AvailableNot Available+3783209 - 3783222Not Available
Putative tail proteinVL15_16205Not Available+3784057 - 378456018360.2
Hypothetical proteinVL15_16210Not Available+3784658 - 378496011154.2
Bacteriophage tail length determination proteinVL15_16215Not Available+3785041 - 378748884908.7
Putative phage tail proteinVL15_16220Not Available+3787499 - 378837730904.9
Tail protein xVL15_16225Not Available+3788352 - 37885587536.9
Tail proteinVL15_16230P21679+3788568 - 378961737293.7
Holin gp22VL15_16235P51773+3789695 - 37899889992.69

Displaying genes 1 – 10 of 7596 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

453 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da

Displaying 1–10 of 453 metabolites