Chromobacterium sp. LK11 71

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Chromobacteriaceae

Genus

Chromobacterium

Description

Chromobacterium sp. LK11 71 is a bacterium characterized by the presence of flagella, which are crucial for its motility. This motility can provide advantages in various environments, allowing the organism to navigate toward nutrients or away from harmful substances. The genome of Chromobacterium sp. LK11 71 consists of a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation. The accession number for this strain is LDUR00000000.1, which serves as a reference for accessing its genomic data. Understanding the genetic and physiological traits of Chromobacterium sp. LK11 71 can provide insights into its potential ecological roles and interactions within its environment. The presence of flagella suggests that Chromobacterium sp. LK11 71 may play a role in nutrient cycling or the degradation of organic materials in its habitat. Its motility allows for adaptability in diverse environments, which is significant in microbial ecology. The organism's ability to move toward favorable conditions or resources may enhance its survival and influence local microbial communities. Therefore, studying Chromobacterium sp. LK11 71 can contribute to a broader understanding of microbial dynamics and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyChromobacteriaceae
GenusChromobacterium
SpeciesChromobacterium sp. LK11
Strain71

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chromobacterium sp. LK11 71


Gene Summary

Adenine Count

884474 bp

Thymine Count

891814 bp

Guanine Count

1650223 bp

Cytosine Count

1643230 bp

Genome Length

5069741 bp

Protein-coding Genes

4219 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Phosphoheptose isomeraseVK98_21120C4LC62Negative4744039 - 474462320950.0
Putative ci repressorVK98_21125Not AvailableNegative4744685 - 474535624696.3
Dna transposition proteinVK98_21130Not AvailablePositive4745734 - 474614714883.2
Endolysin-like proteinVK98_21135Q37979Positive4746285 - 474670715388.3
Hypothetical proteinVK98_21140Not AvailablePositive4746707 - 47469287906.81
Dksa-like zinc finger domain containing proteinVK98_21150Not AvailablePositive4747503 - 47477007447.63
hypothetical proteinVK98_21155Not AvailablePositive4747715 - 47479307795.65
hypothetical proteinVK98_21165Not AvailablePositive4748771 - 474946925237.9
Tail sheath protein gplVK98_21170Not AvailablePositive4749545 - 475096649420.1
Tail tube proteinVK98_21175Not AvailablePositive4751120 - 475149413584.3

Displaying genes 1 – 10 of 4312 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

269 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 269 metabolites

Health Effects

No health effects information available for this bacterium.