Photobacterium aquae strain CGMCC 1.12159

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium aquae strain CGMCC 1.12159 is characterized by the presence of flagella, which suggests motility in aquatic environments. This trait is essential for the organism's ability to navigate and respond to its surroundings, potentially aiding in nutrient acquisition and colonization. Genetically, Photobacterium aquae strain CGMCC 1.12159 possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various ecological niches. The strain is cataloged under the accession LDOT00000000.1, which facilitates its identification and classification within microbial databases. The presence of flagella and the singular replicon suggest that Photobacterium aquae strain CGMCC 1.12159 may be well-suited for survival in dynamic aquatic habitats, where mobility and genetic stability are advantageous. This adaptability can play a crucial role in its ecological interactions, including potential symbiotic relationships with other microorganisms or participation in biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aquae
Strainstrain CGMCC 1.12159

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aquae strain CGMCC 1.12159 contig0114, whole genome

Gene Summary

Adenine Count

1296295 bp

Thymine Count

1288539 bp

Guanine Count

1235732 bp

Cytosine Count

1258169 bp

Genome Length

5078735 bp

Protein-coding Genes

4342 genes

Non-Coding Genes

153 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aspartoacylaseABT56_15560Not AvailablePositive3495917 - 349679232985.0
bcct transporterABT56_15565Not AvailableNegative3496883 - 349847557345.6
dna alkylation repair proteinABT56_15570Not AvailablePositive3498865 - 349959928434.5
hypothetical proteinABT56_15575Not AvailablePositive3499600 - 349991411305.6
hypothetical proteinABT56_15580Not AvailableNegative3500441 - 350074011017.0
atp-dependent dna helicase recqABT56_15585Not AvailableNegative3500854 - 350278272545.3
chemotaxis proteinABT56_15590Not AvailableNegative3502981 - 350455557515.7
chemotaxis proteinABT56_15595Not AvailablePositive3505141 - 350678459490.4
hypothetical proteinABT56_15605Not AvailableNegative3507435 - 350779113581.7
hypothetical proteinABT56_15610Not AvailablePositive3508094 - 350911338536.1

Displaying genes 3031 – 3040 of 4495 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.